Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gm24845-201ENSMUST00000158034 109 ntBASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gm5370-201ENSMUST00000187187 574 ntBASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gm17931-201ENSMUST00000208132 634 ntBASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdk5rap3Q99LM2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Gm38158-201ENSMUST00000194617 339 ntBASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdk5rap3Q99LM2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdk5rap3Q99LM2 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms