Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Olfr582-201ENSMUST00000098212 960 ntBASIC10.94□□□□□ -0.66
Lims1Q99JW4 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lims1Q99JW4 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.93□□□□□ -0.66
Lims1Q99JW4 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.93□□□□□ -0.66
Lims1Q99JW4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.93□□□□□ -0.66
Lims1Q99JW4 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Lims1Q99JW4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.93□□□□□ -0.66
Lims1Q99JW4 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.93□□□□□ -0.66
Lims1Q99JW4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.93□□□□□ -0.66
Lims1Q99JW4 Gm18893-201ENSMUST00000198416 943 ntBASIC10.93□□□□□ -0.66
Lims1Q99JW4 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.93□□□□□ -0.66
Lims1Q99JW4 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.93□□□□□ -0.66
Lims1Q99JW4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.93□□□□□ -0.66
Lims1Q99JW4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.93□□□□□ -0.66
Lims1Q99JW4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lims1Q99JW4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.92□□□□□ -0.66
Lims1Q99JW4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.92□□□□□ -0.66
Lims1Q99JW4 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Gm10434-201ENSMUST00000101158 471 ntBASIC10.92□□□□□ -0.66
Lims1Q99JW4 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Gm6114-201ENSMUST00000182472 968 ntBASIC10.92□□□□□ -0.66
Lims1Q99JW4 Gm9192-201ENSMUST00000183221 985 ntBASIC10.92□□□□□ -0.66
Lims1Q99JW4 Gm37008-201ENSMUST00000195712 319 ntBASIC10.92□□□□□ -0.66
Lims1Q99JW4 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.92□□□□□ -0.66
Lims1Q99JW4 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.92□□□□□ -0.66
Lims1Q99JW4 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Lims1Q99JW4 BC043934-202ENSMUST00000185694 2356 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms