Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Gm28388-201ENSMUST00000186262 437 ntBASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Gm38151-201ENSMUST00000195085 289 ntBASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcd2Q99JR8 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Gm16166-201ENSMUST00000118291 787 ntBASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Gm14942-201ENSMUST00000119642 336 ntBASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Gm7150-201ENSMUST00000122032 981 ntBASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Gm37458-201ENSMUST00000194055 410 ntBASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Gm45113-201ENSMUST00000207518 165 ntBASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.1□□□□□ -0.47
Smarcd2Q99JR8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Gm7940-201ENSMUST00000218195 769 ntBASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcd2Q99JR8 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms