Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC18.66■□□□□ 0.58
Clip1Q922J3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC18.66■□□□□ 0.58
Clip1Q922J3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Gm44315-201ENSMUST00000203041 219 ntBASIC18.66■□□□□ 0.58
Clip1Q922J3 Gm8574-201ENSMUST00000203207 924 ntBASIC18.66■□□□□ 0.58
Clip1Q922J3 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Gm3028-201ENSMUST00000213805 1119 ntBASIC18.66■□□□□ 0.58
Clip1Q922J3 AC134869.4-202ENSMUST00000224350 837 ntBASIC18.66■□□□□ 0.58
Clip1Q922J3 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Clip1Q922J3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Gm45199-201ENSMUST00000207640 1507 ntBASIC18.65■□□□□ 0.58
Clip1Q922J3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Gm36970-201ENSMUST00000193688 1859 ntBASIC18.65■□□□□ 0.58
Clip1Q922J3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Clip1Q922J3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Clip1Q922J3 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Clip1Q922J3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Mir8093-201ENSMUST00000185043 137 ntBASIC18.65■□□□□ 0.58
Clip1Q922J3 Gm8531-201ENSMUST00000188319 893 ntBASIC18.65■□□□□ 0.58
Clip1Q922J3 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC18.65■□□□□ 0.58
Clip1Q922J3 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC18.65■□□□□ 0.58
Clip1Q922J3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC18.65■□□□□ 0.58
Clip1Q922J3 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC18.65■□□□□ 0.58
Clip1Q922J3 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Clip1Q922J3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clip1Q922J3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clip1Q922J3 Gm10305-201ENSMUST00000195331 2475 ntBASIC18.64■□□□□ 0.58
Clip1Q922J3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Clip1Q922J3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC18.64■□□□□ 0.57
Clip1Q922J3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Clip1Q922J3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Clip1Q922J3 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Clip1Q922J3 Gm13347-201ENSMUST00000120298 1353 ntBASIC18.64■□□□□ 0.57
Clip1Q922J3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
Clip1Q922J3 Gm13668-201ENSMUST00000119237 1001 ntBASIC18.64■□□□□ 0.57
Clip1Q922J3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC18.64■□□□□ 0.57
Clip1Q922J3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC18.64■□□□□ 0.57
Clip1Q922J3 n-R5s84-201ENSMUST00000122591 109 ntBASIC18.64■□□□□ 0.57
Clip1Q922J3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC18.64■□□□□ 0.57
Clip1Q922J3 Gm5100-201ENSMUST00000195631 589 ntBASIC18.64■□□□□ 0.57
Clip1Q922J3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC18.64■□□□□ 0.57
Clip1Q922J3 Gm5982-201ENSMUST00000196234 512 ntBASIC18.64■□□□□ 0.57
Clip1Q922J3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC18.64■□□□□ 0.57
Clip1Q922J3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Clip1Q922J3 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Clip1Q922J3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip1Q922J3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Clip1Q922J3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip1Q922J3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip1Q922J3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip1Q922J3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip1Q922J3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Clip1Q922J3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip1Q922J3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Clip1Q922J3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms