Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm44395-201ENSMUST00000197056 153 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm43179-201ENSMUST00000198797 275 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Olfr284-202ENSMUST00000206647 966 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm44603-201ENSMUST00000206820 367 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Olfr472-202ENSMUST00000210420 1083 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm45551-201ENSMUST00000211459 928 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 AC147639.1-201ENSMUST00000224216 661 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Mir339-201ENSMUST00000083659 96 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdhb20Q91XZ9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm10434-201ENSMUST00000101158 471 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm8858-201ENSMUST00000118259 342 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm15895-201ENSMUST00000157018 731 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm3008-201ENSMUST00000160566 571 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Zfp572-202ENSMUST00000184208 1078 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm37489-201ENSMUST00000191883 159 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm4430-202ENSMUST00000193902 1041 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm44869-201ENSMUST00000208836 357 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm9655-201ENSMUST00000211321 1284 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm10608-202ENSMUST00000213924 676 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm17820-201ENSMUST00000220213 1068 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 AC159622.1-201ENSMUST00000221004 554 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 AC154640.1-204ENSMUST00000227105 648 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm24526-201ENSMUST00000082921 158 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms