Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Mospd4-201ENSMUST00000180618 576 ntBASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Mir8109-201ENSMUST00000184375 117 ntBASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Btrc-209ENSMUST00000224478 2194 ntBASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga11Q91XY8 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Gm28882-201ENSMUST00000185504 314 ntBASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Gm42937-201ENSMUST00000197360 752 ntBASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Gm18711-201ENSMUST00000199341 750 ntBASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhga11Q91XY8 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.65□□□□□ -0.55
Pcdhga11Q91XY8 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhga11Q91XY8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhga11Q91XY8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhga11Q91XY8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhga11Q91XY8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhga11Q91XY8 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhga11Q91XY8 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhga11Q91XY8 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Gm13875-201ENSMUST00000120162 282 ntBASIC11.64□□□□□ -0.55
Pcdhga11Q91XY8 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms