Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhga4Q91XY4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm24845-201ENSMUST00000158034 109 ntBASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm32999-201ENSMUST00000192693 562 ntBASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhga4Q91XY4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms