Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.89□□□□□ -0.51
Vsx1Q91V10 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.89□□□□□ -0.51
Vsx1Q91V10 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Gm43186-201ENSMUST00000198130 824 ntBASIC11.89□□□□□ -0.51
Vsx1Q91V10 Gm7902-201ENSMUST00000198842 947 ntBASIC11.89□□□□□ -0.51
Vsx1Q91V10 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.89□□□□□ -0.51
Vsx1Q91V10 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.89□□□□□ -0.51
Vsx1Q91V10 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.89□□□□□ -0.51
Vsx1Q91V10 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.89□□□□□ -0.51
Vsx1Q91V10 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Vsx1Q91V10 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gm15352-201ENSMUST00000118696 270 ntBASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gm7722-201ENSMUST00000120646 741 ntBASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Mir6923-201ENSMUST00000184592 72 ntBASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gm5621-201ENSMUST00000187303 640 ntBASIC11.88□□□□□ -0.51
Vsx1Q91V10 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gm19640-201ENSMUST00000214849 464 ntBASIC11.88□□□□□ -0.51
Vsx1Q91V10 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gm19009-201ENSMUST00000223072 823 ntBASIC11.88□□□□□ -0.51
Vsx1Q91V10 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vsx1Q91V10 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.88□□□□□ -0.51
Vsx1Q91V10 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.87□□□□□ -0.51
Vsx1Q91V10 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms