Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Gm13392-201ENSMUST00000117708 150 ntBASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Gm30285-201ENSMUST00000214614 422 ntBASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Gm2594-201ENSMUST00000214774 742 ntBASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.05□□□□□ -0.8
H1fooQ8VIK3 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.05□□□□□ -0.8
H1fooQ8VIK3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.05□□□□□ -0.8
H1fooQ8VIK3 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Gm12241-201ENSMUST00000118330 726 ntBASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
H1fooQ8VIK3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms