Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 AC112945.1-201ENSMUST00000226413 514 ntBASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chmp7Q8R1T1 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm11783-201ENSMUST00000119549 885 ntBASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm12899-201ENSMUST00000120565 551 ntBASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm13182-201ENSMUST00000122241 312 ntBASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Mir1901-201ENSMUST00000122616 78 ntBASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm23153-201ENSMUST00000175323 313 ntBASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm18367-201ENSMUST00000176139 600 ntBASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm3551-201ENSMUST00000190750 664 ntBASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm38151-201ENSMUST00000195085 289 ntBASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm44329-201ENSMUST00000197469 112 ntBASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm45113-201ENSMUST00000207518 165 ntBASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 AC153929.1-201ENSMUST00000219009 303 ntBASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 CT009489.1-201ENSMUST00000227740 1893 ntBASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Gm9796-201ENSMUST00000062249 2250 ntBASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp7Q8R1T1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Mir6998-201ENSMUST00000183343 64 ntBASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Gm37905-201ENSMUST00000195310 341 ntBASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Gm6450-201ENSMUST00000200896 574 ntBASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Gm2875-201ENSMUST00000211333 360 ntBASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp7Q8R1T1 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm25076-201ENSMUST00000104098 132 ntBASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms