Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Calcoco1Q8CGU1 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Calcoco1Q8CGU1 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Calcoco1Q8CGU1 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Calcoco1Q8CGU1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Calcoco1Q8CGU1 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Calcoco1Q8CGU1 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Calcoco1Q8CGU1 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Calcoco1Q8CGU1 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Gm22018-201ENSMUST00000104357 131 ntBASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Gm37008-201ENSMUST00000195712 319 ntBASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Calcoco1Q8CGU1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Gm37042-201ENSMUST00000193816 581 ntBASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Gm9823-201ENSMUST00000051212 327 ntBASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Snora73a-201ENSMUST00000082453 205 ntBASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Calcoco1Q8CGU1 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms