Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm43002-201ENSMUST00000200310 155 ntBASIC10.68□□□□□ -0.7
ShfQ8CG80 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.68□□□□□ -0.7
ShfQ8CG80 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ShfQ8CG80 Gm5950-201ENSMUST00000213337 772 ntBASIC10.68□□□□□ -0.7
ShfQ8CG80 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.68□□□□□ -0.7
ShfQ8CG80 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.68□□□□□ -0.7
ShfQ8CG80 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.68□□□□□ -0.7
ShfQ8CG80 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ShfQ8CG80 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
ShfQ8CG80 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
ShfQ8CG80 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ShfQ8CG80 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
ShfQ8CG80 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ShfQ8CG80 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
ShfQ8CG80 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.68□□□□□ -0.7
ShfQ8CG80 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.68□□□□□ -0.7
ShfQ8CG80 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
ShfQ8CG80 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
ShfQ8CG80 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
ShfQ8CG80 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
ShfQ8CG80 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
ShfQ8CG80 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.68□□□□□ -0.7
ShfQ8CG80 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
ShfQ8CG80 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.68□□□□□ -0.7
ShfQ8CG80 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
ShfQ8CG80 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ShfQ8CG80 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
ShfQ8CG80 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.67□□□□□ -0.7
ShfQ8CG80 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.67□□□□□ -0.7
ShfQ8CG80 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Gm43133-201ENSMUST00000197472 463 ntBASIC10.67□□□□□ -0.7
ShfQ8CG80 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.67□□□□□ -0.7
ShfQ8CG80 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.67□□□□□ -0.7
ShfQ8CG80 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.67□□□□□ -0.7
ShfQ8CG80 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.67□□□□□ -0.7
ShfQ8CG80 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ShfQ8CG80 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.66□□□□□ -0.7
ShfQ8CG80 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
ShfQ8CG80 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.66□□□□□ -0.7
ShfQ8CG80 Gm11531-201ENSMUST00000117614 555 ntBASIC10.66□□□□□ -0.7
ShfQ8CG80 Gm7722-201ENSMUST00000120646 741 ntBASIC10.66□□□□□ -0.7
ShfQ8CG80 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.66□□□□□ -0.7
ShfQ8CG80 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ShfQ8CG80 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.66□□□□□ -0.7
ShfQ8CG80 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.66□□□□□ -0.7
ShfQ8CG80 Gm5370-201ENSMUST00000187187 574 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms