Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.78□□□□□ -0.04
Smc5Q8CG46 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.78□□□□□ -0.04
Smc5Q8CG46 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.78□□□□□ -0.04
Smc5Q8CG46 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.78□□□□□ -0.04
Smc5Q8CG46 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc5Q8CG46 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc5Q8CG46 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Smc5Q8CG46 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc5Q8CG46 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.77□□□□□ -0.04
Smc5Q8CG46 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc5Q8CG46 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Smc5Q8CG46 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Smc5Q8CG46 Gm21939-201ENSMUST00000221137 2773 ntBASIC14.77□□□□□ -0.04
Smc5Q8CG46 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc5Q8CG46 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc5Q8CG46 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc5Q8CG46 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.77□□□□□ -0.05
Smc5Q8CG46 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.77□□□□□ -0.05
Smc5Q8CG46 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Smc5Q8CG46 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Gm5187-201ENSMUST00000117317 991 ntBASIC14.76□□□□□ -0.05
Smc5Q8CG46 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.76□□□□□ -0.05
Smc5Q8CG46 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Gm8712-201ENSMUST00000221090 701 ntBASIC14.76□□□□□ -0.05
Smc5Q8CG46 Morn2-202ENSMUST00000227729 656 ntBASIC14.76□□□□□ -0.05
Smc5Q8CG46 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.76□□□□□ -0.05
Smc5Q8CG46 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smc5Q8CG46 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc5Q8CG46 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc5Q8CG46 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc5Q8CG46 Gm37969-201ENSMUST00000195777 3409 ntBASIC14.75□□□□□ -0.05
Smc5Q8CG46 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc5Q8CG46 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc5Q8CG46 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Smc5Q8CG46 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms