Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ccdc28bQ8CEG5 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Gm24830-201ENSMUST00000102024 166 ntBASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Gm26232-201ENSMUST00000083360 166 ntBASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc28bQ8CEG5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Gm4271-201ENSMUST00000174444 973 ntBASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Gm2423-201ENSMUST00000074863 733 ntBASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.85□□□□□ -0.51
Ccdc28bQ8CEG5 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc28bQ8CEG5 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms