Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Alx1Q8C8B0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Gm23251-201ENSMUST00000103773 110 ntBASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Gm13263-201ENSMUST00000121271 838 ntBASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Mir8093-201ENSMUST00000185043 137 ntBASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx1Q8C8B0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.94□□□□□ -0.18
Alx1Q8C8B0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx1Q8C8B0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.93□□□□□ -0.18
Alx1Q8C8B0 Gm13045-201ENSMUST00000119019 712 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms