Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Uba3Q8C878 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.62□□□□□ -0.39
Uba3Q8C878 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Uba3Q8C878 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.61□□□□□ -0.39
Uba3Q8C878 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.61□□□□□ -0.39
Uba3Q8C878 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.61□□□□□ -0.39
Uba3Q8C878 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Uba3Q8C878 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Gm23949-201ENSMUST00000104027 127 ntBASIC12.61□□□□□ -0.39
Uba3Q8C878 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Gm15236-201ENSMUST00000117309 379 ntBASIC12.61□□□□□ -0.39
Uba3Q8C878 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.61□□□□□ -0.39
Uba3Q8C878 Gm12380-201ENSMUST00000119012 544 ntBASIC12.61□□□□□ -0.39
Uba3Q8C878 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Gm27341-201ENSMUST00000183570 106 ntBASIC12.61□□□□□ -0.39
Uba3Q8C878 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Uba3Q8C878 Gm18212-201ENSMUST00000211678 889 ntBASIC12.61□□□□□ -0.39
Uba3Q8C878 Gm17827-201ENSMUST00000211825 742 ntBASIC12.61□□□□□ -0.39
Uba3Q8C878 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Uba3Q8C878 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.61□□□□□ -0.39
Uba3Q8C878 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Uba3Q8C878 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Uba3Q8C878 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Uba3Q8C878 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.61□□□□□ -0.39
Uba3Q8C878 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Uba3Q8C878 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
Uba3Q8C878 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.61□□□□□ -0.39
Uba3Q8C878 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Uba3Q8C878 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Uba3Q8C878 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Uba3Q8C878 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.6□□□□□ -0.39
Uba3Q8C878 Gm12036-201ENSMUST00000120008 530 ntBASIC12.6□□□□□ -0.39
Uba3Q8C878 Gm14277-201ENSMUST00000121195 360 ntBASIC12.6□□□□□ -0.39
Uba3Q8C878 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.6□□□□□ -0.39
Uba3Q8C878 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.6□□□□□ -0.39
Uba3Q8C878 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.6□□□□□ -0.39
Uba3Q8C878 Gm24990-201ENSMUST00000157406 323 ntBASIC12.6□□□□□ -0.39
Uba3Q8C878 Gm29199-201ENSMUST00000187766 775 ntBASIC12.6□□□□□ -0.39
Uba3Q8C878 Gm28071-201ENSMUST00000190355 478 ntBASIC12.6□□□□□ -0.39
Uba3Q8C878 Gm8956-201ENSMUST00000203939 825 ntBASIC12.6□□□□□ -0.39
Uba3Q8C878 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.6□□□□□ -0.39
Uba3Q8C878 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Uba3Q8C878 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.6□□□□□ -0.39
Uba3Q8C878 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.59□□□□□ -0.39
Uba3Q8C878 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Uba3Q8C878 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Uba3Q8C878 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Uba3Q8C878 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Uba3Q8C878 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Uba3Q8C878 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Uba3Q8C878 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Uba3Q8C878 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Uba3Q8C878 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Uba3Q8C878 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Uba3Q8C878 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms