Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Gm7584-201ENSMUST00000175829 940 ntBASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Gm43962-201ENSMUST00000203898 190 ntBASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trub1Q8C0D0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Gm13296-201ENSMUST00000117854 997 ntBASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Gm13350-201ENSMUST00000120519 479 ntBASIC12.34□□□□□ -0.43
Trub1Q8C0D0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Gm17376-201ENSMUST00000166016 84 ntBASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Gm8956-201ENSMUST00000203939 825 ntBASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trub1Q8C0D0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms