Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Gm13996-201ENSMUST00000118456 430 ntBASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Rprl1-201ENSMUST00000158050 327 ntBASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Gm45186-201ENSMUST00000206874 478 ntBASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Srrm4Q8BKA3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gm23912-201ENSMUST00000104687 87 ntBASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gm11989-201ENSMUST00000117240 672 ntBASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gm11362-201ENSMUST00000118838 850 ntBASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gm2383-201ENSMUST00000181461 807 ntBASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gm44262-201ENSMUST00000204969 372 ntBASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Srrm4Q8BKA3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Srrm4Q8BKA3 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Srrm4Q8BKA3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Srrm4Q8BKA3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Srrm4Q8BKA3 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.4□□□□□ -0.74
Srrm4Q8BKA3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
Srrm4Q8BKA3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Srrm4Q8BKA3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Srrm4Q8BKA3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Srrm4Q8BKA3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Srrm4Q8BKA3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms