Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chmp2bQ8BJF9 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Gm12036-201ENSMUST00000120008 530 ntBASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Gm17150-201ENSMUST00000165577 381 ntBASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Gm27731-201ENSMUST00000185192 107 ntBASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Chmp2bQ8BJF9 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Gm23912-201ENSMUST00000104687 87 ntBASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Gm12058-201ENSMUST00000118614 437 ntBASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Gm13316-201ENSMUST00000140537 691 ntBASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Chmp2bQ8BJF9 Gm9136-201ENSMUST00000193368 454 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms