Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Gm18165-201ENSMUST00000217426 928 ntBASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf38Q8BI21 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.6□□□□□ -0.55
Rnf38Q8BI21 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf38Q8BI21 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Gm22018-201ENSMUST00000104357 131 ntBASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Gm8062-201ENSMUST00000139696 444 ntBASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Rprl1-201ENSMUST00000158050 327 ntBASIC11.59□□□□□ -0.55
Rnf38Q8BI21 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms