Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Samm50Q8BGH2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Samm50Q8BGH2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Samm50Q8BGH2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Gm4034-201ENSMUST00000187674 480 ntBASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Samm50Q8BGH2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Mir877-201ENSMUST00000104738 85 ntBASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Samm50Q8BGH2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Gm13570-201ENSMUST00000140763 309 ntBASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Gm27046-201ENSMUST00000182160 463 ntBASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.05□□□□□ -0.16
Samm50Q8BGH2 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Samm50Q8BGH2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms