Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim6Q8BGE7 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Gm1335-201ENSMUST00000121653 386 ntBASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Gm9794-201ENSMUST00000202370 423 ntBASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.74□□□□□ -0.37
Trim6Q8BGE7 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim6Q8BGE7 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Gm27682-201ENSMUST00000183930 110 ntBASIC12.73□□□□□ -0.37
Trim6Q8BGE7 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Gm10076-201ENSMUST00000073238 384 ntBASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim6Q8BGE7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.73□□□□□ -0.37
Trim6Q8BGE7 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim6Q8BGE7 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms