Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.49□□□□□ -0.57
Vrk1Q80X41 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.49□□□□□ -0.57
Vrk1Q80X41 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.48□□□□□ -0.57
Vrk1Q80X41 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.48□□□□□ -0.57
Vrk1Q80X41 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.48□□□□□ -0.57
Vrk1Q80X41 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.48□□□□□ -0.57
Vrk1Q80X41 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vrk1Q80X41 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Gm11663-201ENSMUST00000117888 290 ntBASIC11.47□□□□□ -0.57
Vrk1Q80X41 Gm14460-201ENSMUST00000121511 639 ntBASIC11.47□□□□□ -0.57
Vrk1Q80X41 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.47□□□□□ -0.57
Vrk1Q80X41 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.47□□□□□ -0.57
Vrk1Q80X41 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vrk1Q80X41 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vrk1Q80X41 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms