Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm12857-201ENSMUST00000117678 592 ntBASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm12164-201ENSMUST00000121695 551 ntBASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm8100-201ENSMUST00000182906 988 ntBASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm2965-201ENSMUST00000198365 343 ntBASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm5369-201ENSMUST00000217499 588 ntBASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh19Q80TF3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm14724-201ENSMUST00000118400 537 ntBASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm28686-201ENSMUST00000187404 609 ntBASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm2553-201ENSMUST00000215986 605 ntBASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm1821-202ENSMUST00000227415 750 ntBASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh19Q80TF3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms