Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Gm23912-201ENSMUST00000104687 87 ntBASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Gm7722-201ENSMUST00000120646 741 ntBASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Gm43184-201ENSMUST00000197247 542 ntBASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh8Q7TSK3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Gm14058-201ENSMUST00000116082 735 ntBASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Gm12501-201ENSMUST00000119163 529 ntBASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Gm25881-201ENSMUST00000157783 103 ntBASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Gm270-201ENSMUST00000223010 976 ntBASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Gm26448-201ENSMUST00000082446 203 ntBASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Gm21811-201ENSMUST00000096485 930 ntBASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdh8Q7TSK3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Gm15515-201ENSMUST00000117827 822 ntBASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Gm18711-201ENSMUST00000199341 750 ntBASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Gm45118-201ENSMUST00000208928 825 ntBASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Gm807-202ENSMUST00000224929 408 ntBASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdh8Q7TSK3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms