Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Gm23119-201ENSMUST00000158610 140 ntBASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Gm18054-201ENSMUST00000207539 555 ntBASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctdp1Q7TSG2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Gm13492-201ENSMUST00000119772 665 ntBASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Gm25261-201ENSMUST00000157416 134 ntBASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Gm45880-201ENSMUST00000213041 853 ntBASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ctdp1Q7TSG2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Gm22018-201ENSMUST00000104357 131 ntBASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Gm15198-201ENSMUST00000117283 177 ntBASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ctdp1Q7TSG2 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms