Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Gm14644-201ENSMUST00000116671 647 ntBASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Gm15547-201ENSMUST00000122152 333 ntBASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ssx9Q6XAS3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm11989-201ENSMUST00000117240 672 ntBASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm13392-201ENSMUST00000117708 150 ntBASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm11362-201ENSMUST00000118838 850 ntBASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm11222-201ENSMUST00000119005 738 ntBASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm9230-201ENSMUST00000188228 532 ntBASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Gm10478-201ENSMUST00000084451 396 ntBASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ssx9Q6XAS3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ssx9Q6XAS3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms