Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Timd4Q6U7R4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timd4Q6U7R4 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Timd4Q6U7R4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.18□□□□□ -0.62
Timd4Q6U7R4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Timd4Q6U7R4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Timd4Q6U7R4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Timd4Q6U7R4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Timd4Q6U7R4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Gm24749-201ENSMUST00000157838 343 ntBASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Mir3547-201ENSMUST00000175461 88 ntBASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Gm18753-201ENSMUST00000201000 566 ntBASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Gm5455-201ENSMUST00000058710 715 ntBASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timd4Q6U7R4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Gm14017-201ENSMUST00000121934 386 ntBASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Gm5616-201ENSMUST00000165252 384 ntBASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Gm8741-201ENSMUST00000174736 384 ntBASIC11.16□□□□□ -0.62
Timd4Q6U7R4 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Gm2260-201ENSMUST00000184965 657 ntBASIC11.16□□□□□ -0.62
Timd4Q6U7R4 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Gm45433-201ENSMUST00000209386 247 ntBASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timd4Q6U7R4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms