Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gm11191-201ENSMUST00000117231 610 ntBASIC10.16□□□□□ -0.78
Rif1Q6PR54 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gm16228-201ENSMUST00000162286 809 ntBASIC10.16□□□□□ -0.78
Rif1Q6PR54 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Zfp419-201ENSMUST00000173446 916 ntBASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gm5292-201ENSMUST00000073317 580 ntBASIC10.16□□□□□ -0.78
Rif1Q6PR54 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gm7701-201ENSMUST00000163185 1479 ntBASIC10.16□□□□□ -0.78
Rif1Q6PR54 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC10.15□□□□□ -0.78
Rif1Q6PR54 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Gm23272-201ENSMUST00000104053 129 ntBASIC10.15□□□□□ -0.78
Rif1Q6PR54 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Gm9644-201ENSMUST00000212828 1183 ntBASIC10.15□□□□□ -0.78
Rif1Q6PR54 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.15□□□□□ -0.78
Rif1Q6PR54 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.15□□□□□ -0.78
Rif1Q6PR54 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.15□□□□□ -0.78
Rif1Q6PR54 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rif1Q6PR54 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Gm14270-201ENSMUST00000118388 846 ntBASIC10.15□□□□□ -0.79
Rif1Q6PR54 Gm13039-201ENSMUST00000118638 794 ntBASIC10.15□□□□□ -0.79
Rif1Q6PR54 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Rif1Q6PR54 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.15□□□□□ -0.79
Rif1Q6PR54 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC10.15□□□□□ -0.79
Rif1Q6PR54 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms