Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 BC043934-202ENSMUST00000185694 2356 ntBASIC11.81□□□□□ -0.52
Scaf4Q6PFF0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gm12058-201ENSMUST00000118614 437 ntBASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gm14441-201ENSMUST00000121960 540 ntBASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gm29127-201ENSMUST00000188304 517 ntBASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gm37201-201ENSMUST00000191845 523 ntBASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gm43002-201ENSMUST00000200310 155 ntBASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gm5035-201ENSMUST00000215581 927 ntBASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.8□□□□□ -0.52
Scaf4Q6PFF0 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Gm11439-201ENSMUST00000118598 409 ntBASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.79□□□□□ -0.52
Scaf4Q6PFF0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms