Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Gm10576-201ENSMUST00000191927 825 ntBASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Gm2423-201ENSMUST00000074863 733 ntBASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rnf220Q6PDX6 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Gm45925-201ENSMUST00000218882 744 ntBASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf220Q6PDX6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms