Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Gm13570-201ENSMUST00000140763 309 ntBASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Gm42937-201ENSMUST00000197360 752 ntBASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Gm13142-201ENSMUST00000117213 1453 ntBASIC11□□□□□ -0.65
Smarcd3Q6P9Z1 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Gm42693-201ENSMUST00000196779 631 ntBASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd3Q6P9Z1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Smarcd3Q6P9Z1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms