Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Zfp248Q640N4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC9.13□□□□□ -0.95
Zfp248Q640N4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Gm43433-201ENSMUST00000196573 481 ntBASIC9.13□□□□□ -0.95
Zfp248Q640N4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.13□□□□□ -0.95
Zfp248Q640N4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.13□□□□□ -0.95
Zfp248Q640N4 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.13□□□□□ -0.95
Zfp248Q640N4 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.13□□□□□ -0.95
Zfp248Q640N4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Zfp248Q640N4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Zfp248Q640N4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.12□□□□□ -0.95
Zfp248Q640N4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.12□□□□□ -0.95
Zfp248Q640N4 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Gm6203-201ENSMUST00000209575 1342 ntBASIC9.12□□□□□ -0.95
Zfp248Q640N4 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.12□□□□□ -0.95
Zfp248Q640N4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.12□□□□□ -0.95
Zfp248Q640N4 Gm4986-201ENSMUST00000119731 549 ntBASIC9.12□□□□□ -0.95
Zfp248Q640N4 Gm14832-201ENSMUST00000121289 322 ntBASIC9.12□□□□□ -0.95
Zfp248Q640N4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.12□□□□□ -0.95
Zfp248Q640N4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.12□□□□□ -0.95
Zfp248Q640N4 Gm38002-201ENSMUST00000193255 180 ntBASIC9.12□□□□□ -0.95
Zfp248Q640N4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.12□□□□□ -0.95
Zfp248Q640N4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Gm9996-201ENSMUST00000070359 913 ntBASIC9.12□□□□□ -0.95
Zfp248Q640N4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.12□□□□□ -0.95
Zfp248Q640N4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.12□□□□□ -0.95
Zfp248Q640N4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms