Protein–RNA interactions for Protein: Q61361

Bcan, Brevican core protein, mousemouse

Predictions only

Length 883 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BcanQ61361 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BcanQ61361 Gm8285-201ENSMUST00000208293 759 ntBASIC14.8□□□□□ -0.04
BcanQ61361 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BcanQ61361 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
BcanQ61361 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
BcanQ61361 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.8□□□□□ -0.04
BcanQ61361 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.8□□□□□ -0.04
BcanQ61361 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BcanQ61361 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.8□□□□□ -0.04
BcanQ61361 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BcanQ61361 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BcanQ61361 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BcanQ61361 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
BcanQ61361 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BcanQ61361 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.79□□□□□ -0.04
BcanQ61361 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BcanQ61361 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.79□□□□□ -0.04
BcanQ61361 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BcanQ61361 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BcanQ61361 Gm11660-201ENSMUST00000120955 412 ntBASIC14.79□□□□□ -0.04
BcanQ61361 Gm15566-201ENSMUST00000121130 590 ntBASIC14.79□□□□□ -0.04
BcanQ61361 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.79□□□□□ -0.04
BcanQ61361 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.79□□□□□ -0.04
BcanQ61361 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Gm22144-201ENSMUST00000157402 102 ntBASIC14.79□□□□□ -0.04
BcanQ61361 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BcanQ61361 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
BcanQ61361 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.79□□□□□ -0.04
BcanQ61361 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.79□□□□□ -0.04
BcanQ61361 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Gm44545-201ENSMUST00000208262 746 ntBASIC14.79□□□□□ -0.04
BcanQ61361 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.79□□□□□ -0.04
BcanQ61361 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
BcanQ61361 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.79□□□□□ -0.04
BcanQ61361 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BcanQ61361 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.79□□□□□ -0.04
BcanQ61361 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.79□□□□□ -0.04
BcanQ61361 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
BcanQ61361 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.78□□□□□ -0.04
BcanQ61361 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
BcanQ61361 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Gm15610-201ENSMUST00000120584 195 ntBASIC14.78□□□□□ -0.04
BcanQ61361 Gm15595-201ENSMUST00000120840 961 ntBASIC14.78□□□□□ -0.04
BcanQ61361 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.78□□□□□ -0.04
BcanQ61361 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
BcanQ61361 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.78□□□□□ -0.04
BcanQ61361 Gm17931-201ENSMUST00000208132 634 ntBASIC14.78□□□□□ -0.04
BcanQ61361 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.78□□□□□ -0.04
BcanQ61361 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.78□□□□□ -0.04
BcanQ61361 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
BcanQ61361 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BcanQ61361 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BcanQ61361 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BcanQ61361 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BcanQ61361 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BcanQ61361 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
BcanQ61361 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
BcanQ61361 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.77□□□□□ -0.04
BcanQ61361 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
BcanQ61361 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BcanQ61361 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BcanQ61361 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BcanQ61361 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BcanQ61361 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
BcanQ61361 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BcanQ61361 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.77□□□□□ -0.04
BcanQ61361 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BcanQ61361 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms