Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Gm14109-201ENSMUST00000118814 309 ntBASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Gm5419-201ENSMUST00000119301 527 ntBASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Gm7722-201ENSMUST00000120646 741 ntBASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim38Q5SZ99 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.46□□□□□ -0.42
Trim38Q5SZ99 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.46□□□□□ -0.42
Trim38Q5SZ99 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim38Q5SZ99 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim38Q5SZ99 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim38Q5SZ99 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trim38Q5SZ99 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim38Q5SZ99 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim38Q5SZ99 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Gm12164-201ENSMUST00000121695 551 ntBASIC12.45□□□□□ -0.42
Trim38Q5SZ99 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Gm27516-201ENSMUST00000184237 98 ntBASIC12.45□□□□□ -0.42
Trim38Q5SZ99 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Gm6334-201ENSMUST00000207083 228 ntBASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Cts7-204ENSMUST00000225321 1257 ntBASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim38Q5SZ99 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trim38Q5SZ99 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim38Q5SZ99 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim38Q5SZ99 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim38Q5SZ99 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim38Q5SZ99 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim38Q5SZ99 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim38Q5SZ99 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim38Q5SZ99 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim38Q5SZ99 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim38Q5SZ99 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim38Q5SZ99 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim38Q5SZ99 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim38Q5SZ99 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms