Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Gm24891-201ENSMUST00000104391 136 ntBASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Gm23912-201ENSMUST00000104687 87 ntBASIC12.77□□□□□ -0.37
Shroom1Q5SX79 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.77□□□□□ -0.37
Shroom1Q5SX79 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Gm5733-201ENSMUST00000190232 939 ntBASIC12.77□□□□□ -0.37
Shroom1Q5SX79 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Gm6905-201ENSMUST00000205729 511 ntBASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shroom1Q5SX79 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Gm8100-201ENSMUST00000182906 988 ntBASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Gm4607-201ENSMUST00000206649 577 ntBASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Gm1821-202ENSMUST00000227415 750 ntBASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Map1b-203ENSMUST00000223725 2669 ntBASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shroom1Q5SX79 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Shroom1Q5SX79 Gm12857-201ENSMUST00000117678 592 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms