Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm19287-201ENSMUST00000203190 358 ntBASIC14.37□□□□□ -0.11
Vps54Q5SPW0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps54Q5SPW0 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.37□□□□□ -0.11
Vps54Q5SPW0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Gm8566-201ENSMUST00000120174 465 ntBASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps54Q5SPW0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Gm23699-201ENSMUST00000158835 135 ntBASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Gm9192-201ENSMUST00000183221 985 ntBASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.35□□□□□ -0.11
Vps54Q5SPW0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps54Q5SPW0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Gm7851-201ENSMUST00000117574 323 ntBASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Gm8199-201ENSMUST00000121323 823 ntBASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Gm14441-201ENSMUST00000121960 540 ntBASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Mir3102-201ENSMUST00000175555 104 ntBASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps54Q5SPW0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms