Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Gm15004-201ENSMUST00000119192 630 ntBASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Gm5419-201ENSMUST00000119301 527 ntBASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Gm29410-201ENSMUST00000188383 694 ntBASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Gm5714-201ENSMUST00000197343 566 ntBASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 AC173482.3-201ENSMUST00000225492 1212 ntBASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Gm25201-201ENSMUST00000083093 170 ntBASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Gm15744-201ENSMUST00000161734 213 ntBASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Gm4310-201ENSMUST00000177847 889 ntBASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Gm5100-201ENSMUST00000195631 589 ntBASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Gm44158-201ENSMUST00000203881 505 ntBASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Gm18059-201ENSMUST00000208073 580 ntBASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Gm35713-201ENSMUST00000210516 199 ntBASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Gm9111-201ENSMUST00000219394 709 ntBASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Gm8325-201ENSMUST00000099086 453 ntBASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.29□□□□□ -0.28
Ccdc85aQ5SP85 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Gm12990-201ENSMUST00000120372 468 ntBASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Gm43778-201ENSMUST00000199438 199 ntBASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc85aQ5SP85 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms