Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm11473-201ENSMUST00000118980 359 ntBASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm9192-201ENSMUST00000183221 985 ntBASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm24294-201ENSMUST00000158295 277 ntBASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm6216-201ENSMUST00000182390 687 ntBASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Vps13aQ5H8C4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Gm8268-201ENSMUST00000209683 458 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Gm14165-201ENSMUST00000121456 952 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Gm16547-201ENSMUST00000159474 293 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Gm23647-201ENSMUST00000175042 109 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Rn5s-201ENSMUST00000177555 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Gm22109-201ENSMUST00000177995 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Gm22291-201ENSMUST00000178027 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Gm23284-201ENSMUST00000178069 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Gm25018-201ENSMUST00000179081 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Gm25212-201ENSMUST00000179432 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 Gm26391-201ENSMUST00000179843 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.53□□□□□ -0.56
Vps13aQ5H8C4 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms