Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm27627-201ENSMUST00000183644 150 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm29615-201ENSMUST00000185371 697 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm28224-201ENSMUST00000186078 697 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm29001-201ENSMUST00000186177 697 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm28292-201ENSMUST00000186593 697 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm28101-201ENSMUST00000187608 697 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm29076-201ENSMUST00000187689 697 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm28302-201ENSMUST00000187931 697 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm28646-201ENSMUST00000188220 697 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm28205-201ENSMUST00000189177 697 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm29032-201ENSMUST00000189797 697 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm28695-201ENSMUST00000190300 697 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm37448-201ENSMUST00000192795 697 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm17931-201ENSMUST00000208132 634 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm45433-201ENSMUST00000209386 247 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upf3bQ3ULL6 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Gm22133-201ENSMUST00000102082 109 ntBASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upf3bQ3ULL6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 AY036118-201ENSMUST00000200021 923 ntBASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upf3bQ3ULL6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms