Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm42627-201ENSMUST00000197347 224 ntBASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Gm6013-201ENSMUST00000212264 699 ntBASIC12.72□□□□□ -0.37
Trim43aQ3TL54 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.72□□□□□ -0.37
Trim43aQ3TL54 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Gm8738-201ENSMUST00000172606 329 ntBASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Gm19309-201ENSMUST00000218295 205 ntBASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43aQ3TL54 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43aQ3TL54 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43aQ3TL54 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43aQ3TL54 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.71□□□□□ -0.38
Trim43aQ3TL54 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.71□□□□□ -0.38
Trim43aQ3TL54 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43aQ3TL54 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43aQ3TL54 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43aQ3TL54 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43aQ3TL54 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43aQ3TL54 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Gm8420-201ENSMUST00000097103 598 ntBASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43aQ3TL54 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43aQ3TL54 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms