Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim7Q3TJD7 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim7Q3TJD7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.4□□□□□ -0.26
Pdlim7Q3TJD7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim7Q3TJD7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim7Q3TJD7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim7Q3TJD7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim7Q3TJD7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdlim7Q3TJD7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pdlim7Q3TJD7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pdlim7Q3TJD7 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Gm10169-201ENSMUST00000121822 348 ntBASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Gm6108-201ENSMUST00000208365 367 ntBASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Gm18514-201ENSMUST00000218980 436 ntBASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.39□□□□□ -0.27
Pdlim7Q3TJD7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Gm4034-201ENSMUST00000187674 480 ntBASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Gm9136-201ENSMUST00000193368 454 ntBASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.38□□□□□ -0.27
Pdlim7Q3TJD7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Gm14274-201ENSMUST00000117182 615 ntBASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Gm12943-201ENSMUST00000119616 210 ntBASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.37□□□□□ -0.27
Pdlim7Q3TJD7 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms