Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Gm24231-201ENSMUST00000104315 133 ntBASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Gm42937-201ENSMUST00000197360 752 ntBASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Gm19187-201ENSMUST00000206781 892 ntBASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Khdc4Q3TCX3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Gm14644-201ENSMUST00000116671 647 ntBASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Gm27390-201ENSMUST00000184516 176 ntBASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Gm9230-201ENSMUST00000188228 532 ntBASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Gm37666-201ENSMUST00000194110 866 ntBASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Gm45118-201ENSMUST00000208928 825 ntBASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Khdc4Q3TCX3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Gm15711-201ENSMUST00000118889 535 ntBASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Mir1943-201ENSMUST00000158276 73 ntBASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Gm23699-201ENSMUST00000158835 135 ntBASIC11.43□□□□□ -0.58
Khdc4Q3TCX3 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms