Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Gm4986-201ENSMUST00000119731 549 ntBASIC11.77□□□□□ -0.53
Q3KNL4 Gm12036-201ENSMUST00000120008 530 ntBASIC11.77□□□□□ -0.53
Q3KNL4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Q3KNL4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Q3KNL4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.77□□□□□ -0.53
Q3KNL4 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.77□□□□□ -0.53
Q3KNL4 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.77□□□□□ -0.53
Q3KNL4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Q3KNL4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Q3KNL4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.77□□□□□ -0.53
Q3KNL4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Q3KNL4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.77□□□□□ -0.53
Q3KNL4 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.77□□□□□ -0.53
Q3KNL4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3KNL4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Q3KNL4 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.76□□□□□ -0.53
Q3KNL4 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.76□□□□□ -0.53
Q3KNL4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.76□□□□□ -0.53
Q3KNL4 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.76□□□□□ -0.53
Q3KNL4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Q3KNL4 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.76□□□□□ -0.53
Q3KNL4 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.76□□□□□ -0.53
Q3KNL4 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.76□□□□□ -0.53
Q3KNL4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Q3KNL4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Q3KNL4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Q3KNL4 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Q3KNL4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Q3KNL4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3KNL4 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Q3KNL4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.75□□□□□ -0.53
Q3KNL4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Q3KNL4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Gm13829-201ENSMUST00000119600 138 ntBASIC11.75□□□□□ -0.53
Q3KNL4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.75□□□□□ -0.53
Q3KNL4 Mir1982-201ENSMUST00000157368 74 ntBASIC11.75□□□□□ -0.53
Q3KNL4 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.75□□□□□ -0.53
Q3KNL4 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Q3KNL4 Gm18711-201ENSMUST00000199341 750 ntBASIC11.75□□□□□ -0.53
Q3KNL4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.75□□□□□ -0.53
Q3KNL4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms