Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.19□□□□□ -0.46
Ebf1Q07802 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.19□□□□□ -0.46
Ebf1Q07802 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ebf1Q07802 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ebf1Q07802 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ebf1Q07802 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Gm14724-201ENSMUST00000118400 537 ntBASIC12.19□□□□□ -0.46
Ebf1Q07802 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ebf1Q07802 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ebf1Q07802 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Ebf1Q07802 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.19□□□□□ -0.46
Ebf1Q07802 Gm3332-201ENSMUST00000189337 928 ntBASIC12.19□□□□□ -0.46
Ebf1Q07802 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.19□□□□□ -0.46
Ebf1Q07802 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.19□□□□□ -0.46
Ebf1Q07802 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ebf1Q07802 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ebf1Q07802 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Ebf1Q07802 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.18□□□□□ -0.46
Ebf1Q07802 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Gm8343-201ENSMUST00000182705 994 ntBASIC12.18□□□□□ -0.46
Ebf1Q07802 Gm8100-201ENSMUST00000182906 988 ntBASIC12.18□□□□□ -0.46
Ebf1Q07802 Mir6546-201ENSMUST00000184460 62 ntBASIC12.18□□□□□ -0.46
Ebf1Q07802 Gm9540-201ENSMUST00000188230 478 ntBASIC12.18□□□□□ -0.46
Ebf1Q07802 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Gm8365-201ENSMUST00000197334 648 ntBASIC12.18□□□□□ -0.46
Ebf1Q07802 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.18□□□□□ -0.46
Ebf1Q07802 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Gm807-202ENSMUST00000224929 408 ntBASIC12.18□□□□□ -0.46
Ebf1Q07802 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.18□□□□□ -0.46
Ebf1Q07802 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.18□□□□□ -0.46
Ebf1Q07802 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ebf1Q07802 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.18□□□□□ -0.46
Ebf1Q07802 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Ebf1Q07802 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf1Q07802 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.17□□□□□ -0.46
Ebf1Q07802 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms