Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.98□□□□□ -0.33
Col9a2Q07643 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col9a2Q07643 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col9a2Q07643 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col9a2Q07643 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col9a2Q07643 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col9a2Q07643 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col9a2Q07643 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.97□□□□□ -0.33
Col9a2Q07643 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Gm11949-201ENSMUST00000117640 372 ntBASIC12.97□□□□□ -0.33
Col9a2Q07643 Gm15207-201ENSMUST00000119259 442 ntBASIC12.97□□□□□ -0.33
Col9a2Q07643 Gm8194-201ENSMUST00000159783 859 ntBASIC12.97□□□□□ -0.33
Col9a2Q07643 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.97□□□□□ -0.33
Col9a2Q07643 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Gm9540-201ENSMUST00000188230 478 ntBASIC12.97□□□□□ -0.33
Col9a2Q07643 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.97□□□□□ -0.33
Col9a2Q07643 Gm19287-201ENSMUST00000203190 358 ntBASIC12.97□□□□□ -0.33
Col9a2Q07643 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.97□□□□□ -0.33
Col9a2Q07643 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.97□□□□□ -0.33
Col9a2Q07643 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col9a2Q07643 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.97□□□□□ -0.33
Col9a2Q07643 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.97□□□□□ -0.33
Col9a2Q07643 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.97□□□□□ -0.33
Col9a2Q07643 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col9a2Q07643 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col9a2Q07643 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Col9a2Q07643 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col9a2Q07643 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.96□□□□□ -0.33
Col9a2Q07643 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Col9a2Q07643 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Gm13916-201ENSMUST00000117368 628 ntBASIC12.96□□□□□ -0.33
Col9a2Q07643 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.96□□□□□ -0.33
Col9a2Q07643 Gm12029-201ENSMUST00000120073 832 ntBASIC12.96□□□□□ -0.33
Col9a2Q07643 Gm13263-201ENSMUST00000121271 838 ntBASIC12.96□□□□□ -0.33
Col9a2Q07643 Gm14441-201ENSMUST00000121960 540 ntBASIC12.96□□□□□ -0.33
Col9a2Q07643 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.96□□□□□ -0.33
Col9a2Q07643 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Gm6905-201ENSMUST00000205729 511 ntBASIC12.96□□□□□ -0.33
Col9a2Q07643 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.96□□□□□ -0.33
Col9a2Q07643 Paupar-201ENSMUST00000194826 3482 ntBASIC12.96□□□□□ -0.33
Col9a2Q07643 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Col9a2Q07643 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col9a2Q07643 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Col9a2Q07643 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col9a2Q07643 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col9a2Q07643 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col9a2Q07643 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Col9a2Q07643 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col9a2Q07643 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col9a2Q07643 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms