Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scn1bP97952 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Scn1bP97952 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.95□□□□□ -0.66
Scn1bP97952 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Scn1bP97952 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scn1bP97952 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Scn1bP97952 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scn1bP97952 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scn1bP97952 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Scn1bP97952 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scn1bP97952 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.94□□□□□ -0.66
Scn1bP97952 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Scn1bP97952 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.94□□□□□ -0.66
Scn1bP97952 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.94□□□□□ -0.66
Scn1bP97952 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Scn1bP97952 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Scn1bP97952 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.94□□□□□ -0.66
Scn1bP97952 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.94□□□□□ -0.66
Scn1bP97952 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.94□□□□□ -0.66
Scn1bP97952 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.94□□□□□ -0.66
Scn1bP97952 Gm38671-201ENSMUST00000200573 130 ntBASIC10.94□□□□□ -0.66
Scn1bP97952 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.94□□□□□ -0.66
Scn1bP97952 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.94□□□□□ -0.66
Scn1bP97952 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.94□□□□□ -0.66
Scn1bP97952 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Scn1bP97952 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.94□□□□□ -0.66
Scn1bP97952 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.94□□□□□ -0.66
Scn1bP97952 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Scn1bP97952 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.94□□□□□ -0.66
Scn1bP97952 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Scn1bP97952 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scn1bP97952 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Scn1bP97952 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.93□□□□□ -0.66
Scn1bP97952 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.93□□□□□ -0.66
Scn1bP97952 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.93□□□□□ -0.66
Scn1bP97952 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Gm23984-201ENSMUST00000157139 203 ntBASIC10.93□□□□□ -0.66
Scn1bP97952 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.93□□□□□ -0.66
Scn1bP97952 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.93□□□□□ -0.66
Scn1bP97952 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.93□□□□□ -0.66
Scn1bP97952 Gm18018-201ENSMUST00000198273 408 ntBASIC10.93□□□□□ -0.66
Scn1bP97952 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.93□□□□□ -0.66
Scn1bP97952 Gm45668-201ENSMUST00000211271 493 ntBASIC10.93□□□□□ -0.66
Scn1bP97952 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.93□□□□□ -0.66
Scn1bP97952 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.93□□□□□ -0.66
Scn1bP97952 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.93□□□□□ -0.66
Scn1bP97952 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.93□□□□□ -0.66
Scn1bP97952 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Scn1bP97952 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.93□□□□□ -0.66
Scn1bP97952 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.93□□□□□ -0.66
Scn1bP97952 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.93□□□□□ -0.66
Scn1bP97952 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scn1bP97952 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Scn1bP97952 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Scn1bP97952 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scn1bP97952 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms