Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.39□□□□□ -0.59
Nkx3-2P97503 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Gm23200-201ENSMUST00000104379 132 ntBASIC11.39□□□□□ -0.59
Nkx3-2P97503 Gm11989-201ENSMUST00000117240 672 ntBASIC11.39□□□□□ -0.59
Nkx3-2P97503 Gm11362-201ENSMUST00000118838 850 ntBASIC11.39□□□□□ -0.59
Nkx3-2P97503 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.39□□□□□ -0.59
Nkx3-2P97503 Gm12566-201ENSMUST00000121479 359 ntBASIC11.39□□□□□ -0.59
Nkx3-2P97503 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Gm27627-201ENSMUST00000183644 150 ntBASIC11.39□□□□□ -0.59
Nkx3-2P97503 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.39□□□□□ -0.59
Nkx3-2P97503 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 AU022133-201ENSMUST00000200601 873 ntBASIC11.39□□□□□ -0.59
Nkx3-2P97503 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx3-2P97503 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.38□□□□□ -0.59
Nkx3-2P97503 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.38□□□□□ -0.59
Nkx3-2P97503 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Gm23949-201ENSMUST00000104027 127 ntBASIC11.38□□□□□ -0.59
Nkx3-2P97503 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.38□□□□□ -0.59
Nkx3-2P97503 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Gm27552-201ENSMUST00000183351 62 ntBASIC11.38□□□□□ -0.59
Nkx3-2P97503 Gm27844-201ENSMUST00000183613 62 ntBASIC11.38□□□□□ -0.59
Nkx3-2P97503 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.38□□□□□ -0.59
Nkx3-2P97503 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.38□□□□□ -0.59
Nkx3-2P97503 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkx3-2P97503 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.37□□□□□ -0.59
Nkx3-2P97503 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.37□□□□□ -0.59
Nkx3-2P97503 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx3-2P97503 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms