Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 CT030653.1-201ENSMUST00000224382 1279 ntBASIC15□□□□□ -0.01
Smarcc1P97496 Ap3s1-202ENSMUST00000224622 978 ntBASIC15□□□□□ -0.01
Smarcc1P97496 AC165154.1-201ENSMUST00000226661 340 ntBASIC15□□□□□ -0.01
Smarcc1P97496 AC169036.1-201ENSMUST00000227994 296 ntBASIC15□□□□□ -0.01
Smarcc1P97496 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smarcc1P97496 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smarcc1P97496 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Smarcc1P97496 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Smarcc1P97496 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc1P97496 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Smarcc1P97496 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Smarcc1P97496 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.99□□□□□ -0.01
Smarcc1P97496 Gm11783-201ENSMUST00000119549 885 ntBASIC14.99□□□□□ -0.01
Smarcc1P97496 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC14.99□□□□□ -0.01
Smarcc1P97496 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarcc1P97496 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Smarcc1P97496 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.99□□□□□ -0.01
Smarcc1P97496 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smarcc1P97496 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.98□□□□□ -0.01
Smarcc1P97496 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smarcc1P97496 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Smarcc1P97496 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.98□□□□□ -0.01
Smarcc1P97496 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Smarcc1P97496 Gm23272-201ENSMUST00000104053 129 ntBASIC14.98□□□□□ -0.01
Smarcc1P97496 Gm13022-201ENSMUST00000121181 285 ntBASIC14.98□□□□□ -0.01
Smarcc1P97496 Gm12030-201ENSMUST00000121917 223 ntBASIC14.98□□□□□ -0.01
Smarcc1P97496 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.98□□□□□ -0.01
Smarcc1P97496 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarcc1P97496 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Smarcc1P97496 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC14.98□□□□□ -0.01
Smarcc1P97496 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC14.98□□□□□ -0.01
Smarcc1P97496 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.98□□□□□ -0.01
Smarcc1P97496 Gm5451-201ENSMUST00000080545 579 ntBASIC14.98□□□□□ -0.01
Smarcc1P97496 Olfr584-201ENSMUST00000098210 964 ntBASIC14.98□□□□□ -0.01
Smarcc1P97496 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Smarcc1P97496 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarcc1P97496 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Smarcc1P97496 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.98□□□□□ -0.01
Smarcc1P97496 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smarcc1P97496 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.97□□□□□ -0.01
Smarcc1P97496 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Smarcc1P97496 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Smarcc1P97496 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Smarcc1P97496 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms