Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.06□□□□□ -0.8
Npas1P97459 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Npas1P97459 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Npas1P97459 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Gm12859-201ENSMUST00000117834 427 ntBASIC10.06□□□□□ -0.8
Npas1P97459 Gm15703-201ENSMUST00000120250 880 ntBASIC10.06□□□□□ -0.8
Npas1P97459 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Npas1P97459 Gm17208-201ENSMUST00000168388 535 ntBASIC10.06□□□□□ -0.8
Npas1P97459 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.06□□□□□ -0.8
Npas1P97459 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.06□□□□□ -0.8
Npas1P97459 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.06□□□□□ -0.8
Npas1P97459 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.06□□□□□ -0.8
Npas1P97459 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.06□□□□□ -0.8
Npas1P97459 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.06□□□□□ -0.8
Npas1P97459 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.06□□□□□ -0.8
Npas1P97459 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.06□□□□□ -0.8
Npas1P97459 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Npas1P97459 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Npas1P97459 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.06□□□□□ -0.8
Npas1P97459 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Npas1P97459 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Npas1P97459 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Npas1P97459 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Npas1P97459 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Npas1P97459 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.05□□□□□ -0.8
Npas1P97459 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.05□□□□□ -0.8
Npas1P97459 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Npas1P97459 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Gm24231-201ENSMUST00000104315 133 ntBASIC10.05□□□□□ -0.8
Npas1P97459 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Npas1P97459 Gm14057-201ENSMUST00000120631 482 ntBASIC10.05□□□□□ -0.8
Npas1P97459 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
Npas1P97459 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.05□□□□□ -0.8
Npas1P97459 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.05□□□□□ -0.8
Npas1P97459 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Gm37042-201ENSMUST00000193816 581 ntBASIC10.05□□□□□ -0.8
Npas1P97459 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.05□□□□□ -0.8
Npas1P97459 Gm38671-201ENSMUST00000200573 130 ntBASIC10.05□□□□□ -0.8
Npas1P97459 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
Npas1P97459 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Npas1P97459 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.05□□□□□ -0.8
Npas1P97459 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.05□□□□□ -0.8
Npas1P97459 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.05□□□□□ -0.8
Npas1P97459 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.05□□□□□ -0.8
Npas1P97459 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Npas1P97459 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.05□□□□□ -0.8
Npas1P97459 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.05□□□□□ -0.8
Npas1P97459 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Npas1P97459 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms